IL_7P7Q_181

3D structure

PDB id

7P7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome bound by PoxtA-EQ2, high-resolution combined volume

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GUC*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7Q_181 not in the Motif Atlas

Homologous match to IL_4LFB_063

Geometric discrepancy: 0.0727

The information below is about IL_4LFB_063

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.5

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

238

Unit IDs

7P7Q|1|a|G|1461
7P7Q|1|a|U|1462
7P7Q|1|a|C|1463
*
7P7Q|1|a|G|1491
7P7Q|1|a|C|1492
7P7Q|1|a|C|1493

Current chains

Chain a

16S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain S

50S ribosomal protein L19

Chain u

30S ribosomal protein S20