IL_7P7R_035

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

ACUAG*CGAAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_035 not in the Motif Atlas

Homologous match to IL_5J7L_274

Geometric discrepancy: 0.1757

The information below is about IL_5J7L_274

Detailed Annotation

Double sheared with non-canonical cWW

Broad Annotation

Double sheared

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7P7R|1|A|A|915
7P7R|1|A|C|916
7P7R|1|A|U|917
7P7R|1|A|A|918
7P7R|1|A|G|919
*
7P7R|1|A|C|938
7P7R|1|A|G|939
7P7R|1|A|A|940
7P7R|1|A|A|941
7P7R|1|A|U|942

Current chains

Chain A

23S rRNA

Nearby chains

Chain P

50S ribosomal protein L16