IL_7P7R_100

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUC*GCGAG

Length

8 nucleotides

Bulged bases

7P7R|1|A|G|2589, 7P7R|1|A|A|2590

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_100 not in the Motif Atlas

Homologous match to IL_7RQB_097

Geometric discrepancy: 0.1122

The information below is about IL_7RQB_097

Detailed Annotation

Isolated non-canonical cWW with bulges

Broad Annotation

Isolated non-canonical cWW with bulges

Motif group

IL_90933.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

11

Unit IDs

7P7R|1|A|C|2523
7P7R|1|A|U|2524
7P7R|1|A|C|2525
*
7P7R|1|A|G|2587
7P7R|1|A|C|2588
7P7R|1|A|G|2589
7P7R|1|A|A|2590
7P7R|1|A|G|2591

Current chains

Chain A

23S rRNA

Nearby chains

Chain 4

50S ribosomal protein L32-3

Chain H

50S ribosomal protein L3