IL_7P7R_109
3D structure
- PDB id
- 7P7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAUAAA*UGAAGC
- Length
- 12 nucleotides
- Bulged bases
- 7P7R|1|A|A|2778
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7R_109 not in the Motif Atlas
- Homologous match to IL_7RQB_107
- Geometric discrepancy: 0.0775
- The information below is about IL_7RQB_107
- Detailed Annotation
- UAA/GAN with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_49767.5
- Basepair signature
- cWW-cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7P7R|1|A|G|2750
7P7R|1|A|A|2751
7P7R|1|A|U|2752
7P7R|1|A|A|2753
7P7R|1|A|A|2754
7P7R|1|A|A|2755
*
7P7R|1|A|U|2775
7P7R|1|A|G|2776
7P7R|1|A|A|2777
7P7R|1|A|A|2778
7P7R|1|A|G|2779
7P7R|1|A|C|2780
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain K
- 50S ribosomal protein L6
- Chain M
- 50S ribosomal protein L13
Coloring options: