IL_7P7R_112

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UGGAAG*UGGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_112 not in the Motif Atlas

Homologous match to IL_4WF9_108

Geometric discrepancy: 0.0833

The information below is about IL_4WF9_108

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_48489.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

9

Unit IDs

7P7R|1|A|U|2857
7P7R|1|A|G|2858
7P7R|1|A|G|2859
7P7R|1|A|A|2860
7P7R|1|A|A|2861
7P7R|1|A|G|2862
*
7P7R|1|A|U|2875
7P7R|1|A|G|2876
7P7R|1|A|G|2877
7P7R|1|A|A|2878
7P7R|1|A|G|2879

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L17

Chain S

50S ribosomal protein L19