IL_7P7R_116
3D structure
- PDB id
- 7P7R (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UUCCC*GAACA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7P7R_116 not in the Motif Atlas
- Geometric match to IL_4V9F_104
- Geometric discrepancy: 0.1272
- The information below is about IL_4V9F_104
- Detailed Annotation
- Symmetric double minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_58103.13
- Basepair signature
- cWW-cSH-cWS-L-tSW-R-R-cWW
- Number of instances in this motif group
- 13
Unit IDs
7P7R|1|B|U|32
7P7R|1|B|U|33
7P7R|1|B|C|34
7P7R|1|B|C|35
7P7R|1|B|C|36
*
7P7R|1|B|G|42
7P7R|1|B|A|43
7P7R|1|B|A|44
7P7R|1|B|C|45
7P7R|1|B|A|46
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain 3
- 50S ribosomal protein L31 type B
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 50S ribosomal protein L5
- Chain R
- 50S ribosomal protein L18
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