IL_7P7U_076

3D structure

PDB id

7P7U (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. faecalis 70S ribosome with P-tRNA, state IV

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7U_076 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1012

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7P7U|1|A|U|1877
7P7U|1|A|U|1878
7P7U|1|A|A|1879
7P7U|1|A|G|1880
*
7P7U|1|A|C|1887
7P7U|1|A|G|1888
7P7U|1|A|A|1889
7P7U|1|A|A|1890
7P7U|1|A|G|1891

Current chains

Chain A

23S rRNA

Nearby chains