IL_7PHC_068

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_068 not in the Motif Atlas

Geometric match to IL_2R8S_002

Geometric discrepancy: 0.2666

The information below is about IL_2R8S_002

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.7

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

7PHC|1|3|U|1871
7PHC|1|3|U|1872
7PHC|1|3|A|1873
7PHC|1|3|G|1874
*
7PHC|1|3|C|1881
7PHC|1|3|G|1882
7PHC|1|3|A|1883
7PHC|1|3|A|1884
7PHC|1|3|G|1885

Current chains

Chain 3

23S ribosomal RNA

Nearby chains