IL_7PHC_069
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- CGAAAUUCCUAG*CCCG
- Length
- 16 nucleotides
- Bulged bases
- 7PHC|1|3|A|1945, 7PHC|1|3|A|1951
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_069 not in the Motif Atlas
- Homologous match to IL_7A0S_072
- Geometric discrepancy: 0.5014
- The information below is about IL_7A0S_072
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04332.3
- Basepair signature
- cWW-L-R-L-cWW-L-L-R-L-R-L
- Number of instances in this motif group
- 2
Unit IDs
7PHC|1|3|C|1941
7PHC|1|3|G|1942
7PHC|1|3|A|1943
7PHC|1|3|A|1944
7PHC|1|3|A|1945
7PHC|1|3|U|1946
7PHC|1|3|U|1947
7PHC|1|3|C|1948
7PHC|1|3|C|1949
7PHC|1|3|U|1950
7PHC|1|3|A|1951
7PHC|1|3|G|1952
*
7PHC|1|3|C|1968
7PHC|1|3|C|1969
7PHC|1|3|C|1970
7PHC|1|3|G|1971
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 5
- Small subunit ribosomal RNA; SSU rRNA
- Chain 6
- Transfer RNA; tRNA
Coloring options: