IL_7PHC_083

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

AAUCGAUG*UUGAU

Length

13 nucleotides

Bulged bases

7PHC|1|3|C|2139

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_083 not in the Motif Atlas

Homologous match to IL_8VTW_086

Geometric discrepancy: 0.5977

The information below is about IL_8VTW_086

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PHC|1|3|A|2136
7PHC|1|3|A|2137
7PHC|1|3|U|2138
7PHC|1|3|C|2139
7PHC|1|3|G|2140
7PHC|1|3|A|2141
7PHC|1|3|U|2142
7PHC|1|3|G|2143
*
7PHC|1|3|U|2162
7PHC|1|3|U|2163
7PHC|1|3|G|2164
7PHC|1|3|A|2165
7PHC|1|3|U|2166

Current chains

Chain 3

23S ribosomal RNA

Nearby chains