IL_7PHC_114
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- AUUAA*UUAU
- Length
- 9 nucleotides
- Bulged bases
- 7PHC|1|5|U|32
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_114 not in the Motif Atlas
- Geometric match to IL_4K27_001
- Geometric discrepancy: 0.2706
- The information below is about IL_4K27_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.3
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 38
Unit IDs
7PHC|1|5|A|30
7PHC|1|5|U|31
7PHC|1|5|U|32
7PHC|1|5|A|33
7PHC|1|5|A|34
*
7PHC|1|5|U|549
7PHC|1|5|U|550
7PHC|1|5|A|551
7PHC|1|5|U|552
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
- Chain K
- 30S ribosomal protein S12
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