IL_7PHC_132
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- GGAAG*CUGUAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_132 not in the Motif Atlas
- Homologous match to IL_5J7L_022
- Geometric discrepancy: 0.5606
- The information below is about IL_5J7L_022
- Detailed Annotation
- tSH-tHW-tWW
- Broad Annotation
- No text annotation
- Motif group
- IL_88269.4
- Basepair signature
- cWW-tWW-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PHC|1|5|G|443
7PHC|1|5|G|444
7PHC|1|5|A|445
7PHC|1|5|A|446
7PHC|1|5|G|447
*
7PHC|1|5|C|480
7PHC|1|5|U|481
7PHC|1|5|G|482
7PHC|1|5|U|483
7PHC|1|5|A|484
7PHC|1|5|C|485
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
- Chain O
- 30S ribosomal protein S16
Coloring options: