IL_7PHC_140

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

UGA*UUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_140 not in the Motif Atlas

Geometric match to IL_7RQB_083

Geometric discrepancy: 0.2495

The information below is about IL_7RQB_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7PHC|1|5|U|589
7PHC|1|5|G|590
7PHC|1|5|A|591
*
7PHC|1|5|U|643
7PHC|1|5|U|644
7PHC|1|5|A|645

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain E

30S ribosomal protein S6

Chain G

30S ribosomal protein S8

Chain N

30S ribosomal protein S15

Chain P

30S ribosomal protein S17