IL_7PHC_168

3D structure

PDB id

7PHC (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

9.9 Å

Loop

Sequence

CCG*CAAG

Length

7 nucleotides

Bulged bases

7PHC|1|5|C|1375, 7PHC|1|5|A|1478

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PHC_168 not in the Motif Atlas

Homologous match to IL_6CZR_165

Geometric discrepancy: 0.2484

The information below is about IL_6CZR_165

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61438.3

Basepair signature

cWW-L-cWW

Number of instances in this motif group

5

Unit IDs

7PHC|1|5|C|1374
7PHC|1|5|C|1375
7PHC|1|5|G|1376
*
7PHC|1|5|C|1476
7PHC|1|5|A|1477
7PHC|1|5|A|1478
7PHC|1|5|G|1479

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain 8

Transfer RNA; tRNA