IL_7PHC_191
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- AGUUGAAGUC*GGUGGAU
- Length
- 17 nucleotides
- Bulged bases
- 7PHC|1|3|U|1241
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_191 not in the Motif Atlas
- Geometric match to IL_4V88_508
- Geometric discrepancy: 0.3866
- The information below is about IL_4V88_508
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99095.1
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7PHC|1|3|A|1238
7PHC|1|3|G|1239
7PHC|1|3|U|1240
7PHC|1|3|U|1241
7PHC|1|3|G|1242
7PHC|1|3|A|1243
7PHC|1|3|A|1244
7PHC|1|3|G|1245
7PHC|1|3|U|1246
7PHC|1|3|C|1247
*
7PHC|1|3|G|1262
7PHC|1|3|G|1263
7PHC|1|3|U|1264
7PHC|1|3|G|1265
7PHC|1|3|G|1266
7PHC|1|3|A|1267
7PHC|1|3|U|1268
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain p
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L22
Coloring options: