IL_7PIA_076
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- UAGC*GUGGG
- Length
- 9 nucleotides
- Bulged bases
- 7PIA|1|3|G|2246
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_076 not in the Motif Atlas
- Geometric match to IL_3NPQ_006
- Geometric discrepancy: 0.3634
- The information below is about IL_3NPQ_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_65740.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 6
Unit IDs
7PIA|1|3|U|2088
7PIA|1|3|A|2089
7PIA|1|3|G|2090
7PIA|1|3|C|2091
*
7PIA|1|3|G|2243
7PIA|1|3|U|2244
7PIA|1|3|G|2245
7PIA|1|3|G|2246
7PIA|1|3|G|2247
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 8
- Transfer RNA; tRNA
- Chain a
- 50S ribosomal protein L2
- Chain v
- 50S ribosomal protein L28
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