IL_7PIA_089
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- UGAG*CGAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_089 not in the Motif Atlas
- Geometric match to IL_4LFB_060
- Geometric discrepancy: 0.2242
- The information below is about IL_4LFB_060
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
7PIA|1|3|U|2358
7PIA|1|3|G|2359
7PIA|1|3|A|2360
7PIA|1|3|G|2361
*
7PIA|1|3|C|2372
7PIA|1|3|G|2373
7PIA|1|3|A|2374
7PIA|1|3|A|2375
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain n
- 50S ribosomal protein L18
- Chain u
- 50S ribosomal protein L27
- Chain z
- 50S ribosomal protein L33 1
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