IL_7PIA_139
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- CGCAGG*CUUAGG
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_139 not in the Motif Atlas
- Geometric match to IL_8ZA4_001
- Geometric discrepancy: 0.371
- The information below is about IL_8ZA4_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
7PIA|1|5|C|578
7PIA|1|5|G|579
7PIA|1|5|C|580
7PIA|1|5|A|581
7PIA|1|5|G|582
7PIA|1|5|G|583
*
7PIA|1|5|C|753
7PIA|1|5|U|754
7PIA|1|5|U|755
7PIA|1|5|A|756
7PIA|1|5|G|757
7PIA|1|5|G|758
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain G
- 30S ribosomal protein S8
- Chain K
- 30S ribosomal protein S12
- Chain N
- 30S ribosomal protein S15
- Chain P
- 30S ribosomal protein S17
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