3D structure

PDB id
7PIA (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
13.6 Å

Loop

Sequence
GGGAGCAAAU*AGUAGUC
Length
17 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIA|1|5|G|771
7PIA|1|5|G|772
7PIA|1|5|G|773
7PIA|1|5|A|774
7PIA|1|5|G|775
7PIA|1|5|C|776
7PIA|1|5|A|777
7PIA|1|5|A|778
7PIA|1|5|A|779
7PIA|1|5|U|780
*
7PIA|1|5|A|796
7PIA|1|5|G|797
7PIA|1|5|U|798
7PIA|1|5|A|799
7PIA|1|5|G|800
7PIA|1|5|U|801
7PIA|1|5|C|802

Current chains

Chain 5
16S ribosomal RNA

Nearby chains

Chain 3
Large subunit ribosomal RNA; LSU rRNA
Chain J
30S ribosomal protein S11
Chain T
30S ribosomal protein S21
Chain a
50S ribosomal protein L2

Coloring options:

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