IL_7PIA_157

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UCC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_157 not in the Motif Atlas

Geometric match to IL_7RQB_083

Geometric discrepancy: 0.2542

The information below is about IL_7RQB_083

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

7PIA|1|5|U|992
7PIA|1|5|C|993
7PIA|1|5|C|994
*
7PIA|1|5|G|1032
7PIA|1|5|U|1033
7PIA|1|5|G|1034

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain B

30S ribosomal protein S3

Chain M

30S ribosomal protein S14 type Z