IL_7PIA_162
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_162 not in the Motif Atlas
- Homologous match to IL_5J7L_050
- Geometric discrepancy: 0.4767
- The information below is about IL_5J7L_050
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_28037.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 65
Unit IDs
7PIA|1|5|G|1052
7PIA|1|5|U|1053
7PIA|1|5|C|1054
*
7PIA|1|5|G|1168
7PIA|1|5|U|1169
7PIA|1|5|C|1170
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain B
- 30S ribosomal protein S3
- Chain D
- 30S ribosomal protein S5
- Chain H
- 30S ribosomal protein S9
- Chain I
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S14 type Z
Coloring options: