3D structure

PDB id
7PIA (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
13.6 Å

Loop

Sequence
UUUAAAAA*UCAAGGA
Length
15 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIA|1|5|U|1404
7PIA|1|5|U|1405
7PIA|1|5|U|1406
7PIA|1|5|A|1407
7PIA|1|5|A|1408
7PIA|1|5|A|1409
7PIA|1|5|A|1410
7PIA|1|5|A|1411
*
7PIA|1|5|U|1440
7PIA|1|5|C|1441
7PIA|1|5|A|1442
7PIA|1|5|A|1443
7PIA|1|5|G|1444
7PIA|1|5|G|1445
7PIA|1|5|A|1446

Current chains

Chain 5
16S ribosomal RNA

Nearby chains

Chain 3
Large subunit ribosomal RNA; LSU rRNA
Chain S
30S ribosomal protein S20
Chain j
50S ribosomal protein L14
Chain o
50S ribosomal protein L19

Coloring options:

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