3D structure

PDB id
7PIA (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
13.6 Å

Loop

Sequence
UUCAG*UGUAGAGUGUAAUGGUGUAAG
Length
26 nucleotides
Bulged bases
7PIA|1|3|A|2344
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIA|1|3|U|2303
7PIA|1|3|U|2304
7PIA|1|3|C|2305
7PIA|1|3|A|2306
7PIA|1|3|G|2307
*
7PIA|1|3|U|2325
7PIA|1|3|G|2326
7PIA|1|3|U|2327
7PIA|1|3|A|2328
7PIA|1|3|G|2329
7PIA|1|3|A|2330
7PIA|1|3|G|2331
7PIA|1|3|U|2332
7PIA|1|3|G|2333
7PIA|1|3|U|2334
7PIA|1|3|A|2335
7PIA|1|3|A|2336
7PIA|1|3|U|2337
7PIA|1|3|G|2338
7PIA|1|3|G|2339
7PIA|1|3|U|2340
7PIA|1|3|G|2341
7PIA|1|3|U|2342
7PIA|1|3|A|2343
7PIA|1|3|A|2344
7PIA|1|3|G|2345

Current chains

Chain 3
23S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain d
50S ribosomal protein L5
Chain n
50S ribosomal protein L18
Chain u
50S ribosomal protein L27
Chain z
50S ribosomal protein L33 1

Coloring options:

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