IL_7PIA_203

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UGUAAG*UUGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_203 not in the Motif Atlas

Homologous match to IL_5J7L_354

Geometric discrepancy: 0.2986

The information below is about IL_5J7L_354

Detailed Annotation

tHS double platform

Broad Annotation

No text annotation

Motif group

IL_70411.2

Basepair signature

cWW-tSH-L-tHH-L-cWW

Number of instances in this motif group

7

Unit IDs

7PIA|1|3|U|2851
7PIA|1|3|G|2852
7PIA|1|3|U|2853
7PIA|1|3|A|2854
7PIA|1|3|A|2855
7PIA|1|3|G|2856
*
7PIA|1|3|U|2869
7PIA|1|3|U|2870
7PIA|1|3|G|2871
7PIA|1|3|A|2872
7PIA|1|3|G|2873

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain m

50S ribosomal protein L17

Chain o

50S ribosomal protein L19