IL_7PIA_207

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UGA*UUGA

Length

7 nucleotides

Bulged bases

7PIA|1|5|G|384

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_207 not in the Motif Atlas

Homologous match to IL_6CZR_128

Geometric discrepancy: 0.5896

The information below is about IL_6CZR_128

Detailed Annotation

Single bulged G, near cWW

Broad Annotation

Single bulged G, near cWW

Motif group

IL_52767.5

Basepair signature

cWW-L-R-cWW

Number of instances in this motif group

28

Unit IDs

7PIA|1|5|U|371
7PIA|1|5|G|372
7PIA|1|5|A|373
*
7PIA|1|5|U|382
7PIA|1|5|U|383
7PIA|1|5|G|384
7PIA|1|5|A|385

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain O

30S ribosomal protein S16