IL_7PIA_239

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

CGGAUU*AUGAAG

Length

12 nucleotides

Bulged bases

7PIA|1|5|G|1305

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_239 not in the Motif Atlas

Homologous match to IL_6CZR_164

Geometric discrepancy: 0.4349

The information below is about IL_6CZR_164

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIA|1|5|C|1277
7PIA|1|5|G|1278
7PIA|1|5|G|1279
7PIA|1|5|A|1280
7PIA|1|5|U|1281
7PIA|1|5|U|1282
*
7PIA|1|5|A|1303
7PIA|1|5|U|1304
7PIA|1|5|G|1305
7PIA|1|5|A|1306
7PIA|1|5|A|1307
7PIA|1|5|G|1308

Current chains

Chain 5

16S ribosomal RNA

Nearby chains

Chain L

30S ribosomal protein S13