IL_7PIB_008
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGUGUAG*CGAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_008 not in the Motif Atlas
- Geometric match to IL_7RQB_007
- Geometric discrepancy: 0.1987
- The information below is about IL_7RQB_007
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
7PIB|1|3|U|243
7PIB|1|3|G|244
7PIB|1|3|U|245
7PIB|1|3|G|246
7PIB|1|3|U|247
7PIB|1|3|A|248
7PIB|1|3|G|249
*
7PIB|1|3|C|257
7PIB|1|3|G|258
7PIB|1|3|A|259
7PIB|1|3|A|260
7PIB|1|3|A|261
7PIB|1|3|G|262
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 1
- 50S ribosomal protein L35
- Chain k
- 50S ribosomal protein L15
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