IL_7PIB_035
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGAAAAG*CGAAGAUGUAACGGGGC
- Length
- 24 nucleotides
- Bulged bases
- 7PIB|1|3|A|1162, 7PIB|1|3|U|1165
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_035 not in the Motif Atlas
- Geometric match to IL_5J7L_281
- Geometric discrepancy: 0.2204
- The information below is about IL_5J7L_281
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.3
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
7PIB|1|3|G|1059
7PIB|1|3|G|1060
7PIB|1|3|A|1061
7PIB|1|3|A|1062
7PIB|1|3|A|1063
7PIB|1|3|A|1064
7PIB|1|3|G|1065
*
7PIB|1|3|C|1159
7PIB|1|3|G|1160
7PIB|1|3|A|1161
7PIB|1|3|A|1162
7PIB|1|3|G|1163
7PIB|1|3|A|1164
7PIB|1|3|U|1165
7PIB|1|3|G|1166
7PIB|1|3|U|1167
7PIB|1|3|A|1168
7PIB|1|3|A|1169
7PIB|1|3|C|1170
7PIB|1|3|G|1171
7PIB|1|3|G|1172
7PIB|1|3|G|1173
7PIB|1|3|G|1174
7PIB|1|3|C|1175
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 2
- 50S ribosomal protein L36
- Chain b
- 50S ribosomal protein L3
- Chain i
- 50S ribosomal protein L13
- Chain l
- 50S ribosomal protein L16
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