IL_7PIB_131
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGACUAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_131 not in the Motif Atlas
- Homologous match to IL_4LFB_020
- Geometric discrepancy: 0.2698
- The information below is about IL_4LFB_020
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.2
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
7PIB|1|5|C|502
7PIB|1|5|G|503
7PIB|1|5|A|504
7PIB|1|5|C|505
7PIB|1|5|U|506
7PIB|1|5|A|507
7PIB|1|5|A|508
7PIB|1|5|C|509
*
7PIB|1|5|G|538
7PIB|1|5|G|539
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
- Chain D
- 30S ribosomal protein S5
- Chain K
- 30S ribosomal protein S12
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