IL_7PIB_134
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGCAG*UUAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_134 not in the Motif Atlas
- Homologous match to IL_5J7L_027
- Geometric discrepancy: 0.1573
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
7PIB|1|5|C|578
7PIB|1|5|G|579
7PIB|1|5|C|580
7PIB|1|5|A|581
7PIB|1|5|G|582
*
7PIB|1|5|U|754
7PIB|1|5|U|755
7PIB|1|5|A|756
7PIB|1|5|G|757
7PIB|1|5|G|758
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain K
- 30S ribosomal protein S12
- Chain N
- 30S ribosomal protein S15
- Chain P
- 30S ribosomal protein S17
Coloring options: