IL_7PIB_144
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CAAAU*AGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_144 not in the Motif Atlas
- Homologous match to IL_4LFB_033
- Geometric discrepancy: 0.2041
- The information below is about IL_4LFB_033
- Detailed Annotation
- tSH-tWH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_05821.2
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 19
Unit IDs
7PIB|1|5|C|776
7PIB|1|5|A|777
7PIB|1|5|A|778
7PIB|1|5|A|779
7PIB|1|5|U|780
*
7PIB|1|5|A|796
7PIB|1|5|G|797
7PIB|1|5|U|798
7PIB|1|5|A|799
7PIB|1|5|G|800
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 3
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 30S ribosomal protein S11
- Chain T
- 30S ribosomal protein S21
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