IL_7PIB_149
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- AUGUUG*CAAACGU
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_149 not in the Motif Atlas
- Geometric match to IL_8C3A_118
- Geometric discrepancy: 0.2247
- The information below is about IL_8C3A_118
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
7PIB|1|5|A|944
7PIB|1|5|U|945
7PIB|1|5|G|946
7PIB|1|5|U|947
7PIB|1|5|U|948
7PIB|1|5|G|949
*
7PIB|1|5|C|1201
7PIB|1|5|A|1202
7PIB|1|5|A|1203
7PIB|1|5|A|1204
7PIB|1|5|C|1205
7PIB|1|5|G|1206
7PIB|1|5|U|1207
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain 8
- Transfer RNA; tRNA
- Chain H
- 30S ribosomal protein S9
- Chain L
- 30S ribosomal protein S13
- Chain R
- 30S ribosomal protein S19
Coloring options: