IL_7PIB_154
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 7PIB|1|5|A|1171
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_154 not in the Motif Atlas
- Geometric match to IL_5TBW_058
- Geometric discrepancy: 0.1979
- The information below is about IL_5TBW_058
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
7PIB|1|5|U|1051
7PIB|1|5|G|1052
*
7PIB|1|5|C|1170
7PIB|1|5|A|1171
7PIB|1|5|A|1172
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 7
- Transfer RNA; tRNA
- Chain B
- 30S ribosomal protein S3
- Chain D
- 30S ribosomal protein S5
- Chain I
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S14 type Z
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