IL_7PIB_159
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CCAGC*GUGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_159 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.3895
- The information below is about IL_5J7L_274
- Detailed Annotation
- Double sheared with non-canonical cWW
- Broad Annotation
- Double sheared
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
7PIB|1|5|C|1234
7PIB|1|5|C|1235
7PIB|1|5|A|1236
7PIB|1|5|G|1237
7PIB|1|5|C|1238
*
7PIB|1|5|G|1247
7PIB|1|5|U|1248
7PIB|1|5|G|1249
7PIB|1|5|A|1250
7PIB|1|5|G|1251
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain R
- 30S ribosomal protein S19
Coloring options: