3D structure

PDB id
7PIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
4.7 Å

Loop

Sequence
AGUGGAGGUAAA*UCUGAAUGCCAUU
Length
25 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIB|1|3|A|888
7PIB|1|3|G|889
7PIB|1|3|U|890
7PIB|1|3|G|891
7PIB|1|3|G|892
7PIB|1|3|A|893
7PIB|1|3|G|894
7PIB|1|3|G|895
7PIB|1|3|U|896
7PIB|1|3|A|897
7PIB|1|3|A|898
7PIB|1|3|A|899
*
7PIB|1|3|U|950
7PIB|1|3|C|951
7PIB|1|3|U|952
7PIB|1|3|G|953
7PIB|1|3|A|954
7PIB|1|3|A|955
7PIB|1|3|U|956
7PIB|1|3|G|957
7PIB|1|3|C|958
7PIB|1|3|C|959
7PIB|1|3|A|960
7PIB|1|3|U|961
7PIB|1|3|U|962

Current chains

Chain 3
23S ribosomal RNA

Nearby chains

Chain 4
5S ribosomal RNA; 5S rRNA
Chain l
50S ribosomal protein L16
Chain u
50S ribosomal protein L27

Coloring options:

Copyright 2026 BGSU RNA group. Page generated in 0.0625 s