3D structure

PDB id
7PIB (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
4.7 Å

Loop

Sequence
GACUC*GUGAGUU
Length
12 nucleotides
Bulged bases
7PIB|1|3|G|2584, 7PIB|1|3|A|2585
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIB|1|3|G|2516
7PIB|1|3|A|2517
7PIB|1|3|C|2518
7PIB|1|3|U|2519
7PIB|1|3|C|2520
*
7PIB|1|3|G|2582
7PIB|1|3|U|2583
7PIB|1|3|G|2584
7PIB|1|3|A|2585
7PIB|1|3|G|2586
7PIB|1|3|U|2587
7PIB|1|3|U|2588

Current chains

Chain 3
23S ribosomal RNA

Nearby chains

Chain b
50S ribosomal protein L3
Chain y
50S ribosomal protein L32

Coloring options:

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