IL_7PIB_193
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGAAA*UUUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_193 not in the Motif Atlas
- Geometric match to IL_8D29_010
- Geometric discrepancy: 0.3479
- The information below is about IL_8D29_010
- Detailed Annotation
- Partly complementary
- Broad Annotation
- Partly complementary
- Motif group
- IL_71154.4
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7PIB|1|5|C|68
7PIB|1|5|G|69
7PIB|1|5|A|70
7PIB|1|5|A|71
7PIB|1|5|A|72
*
7PIB|1|5|U|83
7PIB|1|5|U|84
7PIB|1|5|U|85
7PIB|1|5|A|86
7PIB|1|5|G|87
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain S
- 30S ribosomal protein S20
Coloring options: