IL_7PIB_196
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- CGAUGAAGG*UUGUAAAG
- Length
- 17 nucleotides
- Bulged bases
- 7PIB|1|5|U|408
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_196 not in the Motif Atlas
- Homologous match to IL_6CZR_129
- Geometric discrepancy: 0.3015
- The information below is about IL_6CZR_129
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_58819.1
- Basepair signature
- cWW-L-R-tWH-R-L-tHW-tSS-R-L-R-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
7PIB|1|5|C|405
7PIB|1|5|G|406
7PIB|1|5|A|407
7PIB|1|5|U|408
7PIB|1|5|G|409
7PIB|1|5|A|410
7PIB|1|5|A|411
7PIB|1|5|G|412
7PIB|1|5|G|413
*
7PIB|1|5|U|423
7PIB|1|5|U|424
7PIB|1|5|G|425
7PIB|1|5|U|426
7PIB|1|5|A|427
7PIB|1|5|A|428
7PIB|1|5|A|429
7PIB|1|5|G|430
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
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