IL_7PIB_207
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GCUACU*AAAC
- Length
- 10 nucleotides
- Bulged bases
- 7PIB|1|3|U|902
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_207 not in the Motif Atlas
- Homologous match to IL_9DFE_028
- Geometric discrepancy: 0.2519
- The information below is about IL_9DFE_028
- Detailed Annotation
- C-loop with bulged stacked A's
- Broad Annotation
- C-loop
- Motif group
- IL_16301.2
- Basepair signature
- cWW-cWS-tWH-R-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PIB|1|3|G|900
7PIB|1|3|C|901
7PIB|1|3|U|902
7PIB|1|3|A|903
7PIB|1|3|C|904
7PIB|1|3|U|905
*
7PIB|1|3|A|946
7PIB|1|3|A|947
7PIB|1|3|A|948
7PIB|1|3|C|949
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 4
- 5S ribosomal RNA; 5S rRNA
- Chain l
- 50S ribosomal protein L16
- Chain u
- 50S ribosomal protein L27
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