IL_7PIR_015
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- GAACC*GGAGUGAAAUAGAUU
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_015 not in the Motif Atlas
- Geometric match to IL_4V9F_014
- Geometric discrepancy: 0.3252
- The information below is about IL_4V9F_014
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31504.1
- Basepair signature
- cWW-cWW-cWS-tSH-L-tWH-cWW-tSS-tSH-L-R-L
- Number of instances in this motif group
- 1
Unit IDs
7PIR|1|3|G|517
7PIR|1|3|A|518
7PIR|1|3|A|519
7PIR|1|3|C|520
7PIR|1|3|C|521
*
7PIR|1|3|G|530
7PIR|1|3|G|531
7PIR|1|3|A|532
7PIR|1|3|G|533
7PIR|1|3|U|534
7PIR|1|3|G|535
7PIR|1|3|A|536
7PIR|1|3|A|537
7PIR|1|3|A|538
7PIR|1|3|U|539
7PIR|1|3|A|540
7PIR|1|3|G|541
7PIR|1|3|A|542
7PIR|1|3|U|543
7PIR|1|3|U|544
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain r
- 50S ribosomal protein L22
- Chain t
- 50S ribosomal protein L24
Coloring options: