IL_7PIR_024
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7PIR|1|3|G|811, 7PIR|1|3|A|823, 7PIR|1|3|A|824, 7PIR|1|3|U|825
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_024 not in the Motif Atlas
- Geometric match to IL_7A0S_021
- Geometric discrepancy: 0.2542
- The information below is about IL_7A0S_021
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_89509.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PIR|1|3|G|810
7PIR|1|3|G|811
7PIR|1|3|G|812
*
7PIR|1|3|C|822
7PIR|1|3|A|823
7PIR|1|3|A|824
7PIR|1|3|U|825
7PIR|1|3|C|826
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 0
- 50S ribosomal protein L34
- Chain a
- 50S ribosomal protein L2
- Chain r
- 50S ribosomal protein L22
Coloring options: