IL_7PIR_096
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CUC*GUGAG
- Length
- 8 nucleotides
- Bulged bases
- 7PIR|1|3|G|2584, 7PIR|1|3|A|2585
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_096 not in the Motif Atlas
- Geometric match to IL_7RQB_097
- Geometric discrepancy: 0.2405
- The information below is about IL_7RQB_097
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_90933.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
7PIR|1|3|C|2518
7PIR|1|3|U|2519
7PIR|1|3|C|2520
*
7PIR|1|3|G|2582
7PIR|1|3|U|2583
7PIR|1|3|G|2584
7PIR|1|3|A|2585
7PIR|1|3|G|2586
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain b
- 50S ribosomal protein L3
- Chain y
- 50S ribosomal protein L32
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