IL_7PIR_127
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CGAUGAAG*UGUAAAG
- Length
- 15 nucleotides
- Bulged bases
- 7PIR|1|5|U|408
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_127 not in the Motif Atlas
- Homologous match to IL_4LFB_017
- Geometric discrepancy: 0.5074
- The information below is about IL_4LFB_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62329.1
- Basepair signature
- cWW-tSH-tWH-cWH-L-tHW-tSS-tHH-cWW
- Number of instances in this motif group
- 2
Unit IDs
7PIR|1|5|C|405
7PIR|1|5|G|406
7PIR|1|5|A|407
7PIR|1|5|U|408
7PIR|1|5|G|409
7PIR|1|5|A|410
7PIR|1|5|A|411
7PIR|1|5|G|412
*
7PIR|1|5|U|424
7PIR|1|5|G|425
7PIR|1|5|U|426
7PIR|1|5|A|427
7PIR|1|5|A|428
7PIR|1|5|A|429
7PIR|1|5|G|430
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
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