IL_7PIR_154
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 7PIR|1|5|A|1171
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_154 not in the Motif Atlas
- Geometric match to IL_3OXE_001
- Geometric discrepancy: 0.3319
- The information below is about IL_3OXE_001
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 160
Unit IDs
7PIR|1|5|U|1051
7PIR|1|5|G|1052
*
7PIR|1|5|C|1170
7PIR|1|5|A|1171
7PIR|1|5|A|1172
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 6
- Transfer RNA; tRNA
- Chain B
- 30S ribosomal protein S3
- Chain D
- 30S ribosomal protein S5
- Chain I
- 30S ribosomal protein S10
- Chain M
- 30S ribosomal protein S14 type Z
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