IL_7PIR_175

3D structure

PDB id

7PIR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

12.1 Å

Loop

Sequence

CUGAUGGAG*CUUCUAGG

Length

17 nucleotides

Bulged bases

7PIR|1|3|U|1448

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7PIR|1|3|C|1444
7PIR|1|3|U|1445
7PIR|1|3|G|1446
7PIR|1|3|A|1447
7PIR|1|3|U|1448
7PIR|1|3|G|1449
7PIR|1|3|G|1450
7PIR|1|3|A|1451
7PIR|1|3|G|1452
*
7PIR|1|3|C|1608
7PIR|1|3|U|1609
7PIR|1|3|U|1610
7PIR|1|3|C|1611
7PIR|1|3|U|1612
7PIR|1|3|A|1613
7PIR|1|3|G|1614
7PIR|1|3|G|1615

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain a

50S ribosomal protein L2