3D structure

PDB id
7PIR (explore in PDB, NAKB, or RNA 3D Hub)
Description
70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
Experimental method
ELECTRON MICROSCOPY
Resolution
12.1 Å

Loop

Sequence
AAUACAAAC*GUAAAGUU
Length
17 nucleotides
Bulged bases
7PIR|1|5|U|1260
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7PIR|1|5|A|1220
7PIR|1|5|A|1221
7PIR|1|5|U|1222
7PIR|1|5|A|1223
7PIR|1|5|C|1224
7PIR|1|5|A|1225
7PIR|1|5|A|1226
7PIR|1|5|A|1227
7PIR|1|5|C|1228
*
7PIR|1|5|G|1259
7PIR|1|5|U|1260
7PIR|1|5|A|1261
7PIR|1|5|A|1262
7PIR|1|5|A|1263
7PIR|1|5|G|1264
7PIR|1|5|U|1265
7PIR|1|5|U|1266

Current chains

Chain 5
16S ribosomal RNA

Nearby chains

Chain F
30S ribosomal protein S7
Chain H
30S ribosomal protein S9
Chain I
30S ribosomal protein S10

Coloring options:

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