IL_7PJT_147
3D structure
- PDB id
- 7PJT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with tRNAs in hybrid state 1 (H1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- GGAGUACGGC*GUUAAAAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJT_147 not in the Motif Atlas
- Geometric match to IL_6UFM_002
- Geometric discrepancy: 0.3158
- The information below is about IL_6UFM_002
- Detailed Annotation
- 10x8 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_22278.1
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-R-L-cWW-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
7PJT|1|a|G|887
7PJT|1|a|G|888
7PJT|1|a|A|889
7PJT|1|a|G|890
7PJT|1|a|U|891
7PJT|1|a|A|892
7PJT|1|a|C|893
7PJT|1|a|G|894
7PJT|1|a|G|895
7PJT|1|a|C|896
*
7PJT|1|a|G|903
7PJT|1|a|U|904
7PJT|1|a|U|905
7PJT|1|a|A|906
7PJT|1|a|A|907
7PJT|1|a|A|908
7PJT|1|a|A|909
7PJT|1|a|C|910
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain l
- 30S ribosomal protein S12
Coloring options: