IL_7PJY_029

3D structure

PDB id

7PJY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCAAGG*CCAACC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PJY_029 not in the Motif Atlas

Geometric match to IL_3FTE_001

Geometric discrepancy: 0.3633

The information below is about IL_3FTE_001

Detailed Annotation

Quadruple sheared

Broad Annotation

Quadruple sheared

Motif group

IL_71841.1

Basepair signature

cWW-tSH-L-R-L-R-tHS-cWW

Number of instances in this motif group

4

Unit IDs

7PJY|1|A|G|875
7PJY|1|A|C|876
7PJY|1|A|A|877
7PJY|1|A|A|878
7PJY|1|A|G|879
7PJY|1|A|G|880
*
7PJY|1|A|C|897
7PJY|1|A|C|898
7PJY|1|A|A|899
7PJY|1|A|A|900
7PJY|1|A|C|901
7PJY|1|A|C|902

Current chains

Chain A

23S ribosomal RNA

Nearby chains