IL_7PJZ_111

3D structure

PDB id

7PJZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

UUGA*UAA

Length

7 nucleotides

Bulged bases

7PJZ|1|a|G|31

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PJZ_111 not in the Motif Atlas

Geometric match to IL_3MEI_002

Geometric discrepancy: 0.2756

The information below is about IL_3MEI_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7PJZ|1|a|U|29
7PJZ|1|a|U|30
7PJZ|1|a|G|31
7PJZ|1|a|A|32
*
7PJZ|1|a|U|552
7PJZ|1|a|A|553
7PJZ|1|a|A|554

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain l

30S ribosomal protein S12