IL_7PJZ_190

3D structure

PDB id

7PJZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)

Experimental method

ELECTRON MICROSCOPY

Resolution

6 Å

Loop

Sequence

CU*AGG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PJZ_190 not in the Motif Atlas

Geometric match to IL_5TBW_070

Geometric discrepancy: 0.321

The information below is about IL_5TBW_070

Detailed Annotation

Single stack bend

Broad Annotation

Single stack bend

Motif group

IL_05035.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

38

Unit IDs

7PJZ|1|a|C|339
7PJZ|1|a|U|340
*
7PJZ|1|a|A|349
7PJZ|1|a|G|350
7PJZ|1|a|G|351

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain K

50S ribosomal protein L14

Chain t

30S ribosomal protein S20